Tufts has a strong CS program…
http://www.cs.tufts.edu/About-CS/cool-facts-about-cs-at-tufts.html
which offers a course in developing Music applications…
https://tuftsdev.github.io/MusicAppsOnTheIpad/
with graduates who were recently written up in Forbes for a creating a music sharing application…
http://www.forbes.com/sites/denalitietjen/2015/07/29/cymbal/
The music program has a partnership with the New England Conservatory, but is also very inclusive in that 2000 of the 5000 undergrads participate in music programs each year…
http://as.tufts.edu/music/musiccenter/documents/faqandinfo.pdf
There is also a minor in Music Engineering
https://www.youtube.com/watch?v=akgJSzh5mnY