Fafsa correction restarted my application,

Hello
So the guy who prepared our taxes this year forgot to put apt number on the tax return. I entered everything manually. Today I went to correct the information using the IRS Data retreival tool, but it seems that it cant find the info. Now on the fafsa main page its saying if I want to continue or start over. Is everything fine? Does it matter if I entered them manually or used the tool? They had been processed and recived by all the listed schools.