<ol>
<li><p>Contact the admission office of the schools you applied to by phone. No voicemail, no secretary, get ahold of an actual official and explain the situation. Ask what steps they want you to take next, and explain what steps you plan on taking. Be calm, but very insistent!</p></li>
<li><p>If your school councelor is not responsive to sorting this out step by step with you, don't be afraid of going one level up. This is a major screw-up on your school's behalf, and something they must be held responsible for. Again, don't be angry, just straightforward about this being their responsibility they WILL have to personally help you fix. </p></li>
<li><p>Ask for a corrected transcript: a personal letter from your current school explaining their mistake; and for them to directly contact the admission offices about sending the new material.</p></li>
</ol>
<p>Best of luck. It is possible to come out of this stronger than when you went in, but it requires you to show the authorities you are dealing with that you are both calm and fully clear as to what is going on and whose fault it is. Be polite, not a push-over!</p>