The congress has been republican for a number of years and didn’t make many changes from the previous congresses (that were democratic) for grants and loans guaranteed by the department of education.
Pence and his children have large student loans (Stafford and Plus), so he won’t be looking to change anything.
Schools do not ask what religion you are (except the religious schools) and don’t admit by religion. My daughter’s school has a number of Muslim students, both domestic and foreign. The school has ‘international dorms’ and allows those students to cook their own meals, but the cafeteria also has meals for all religious and dietary needs. I don’t see that changing any time soon even though it is in a red state.